Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rnf13O54965 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Rnf13O54965 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.52□□□□□ -0.73
Rnf13O54965 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Rnf13O54965 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.52□□□□□ -0.73
Rnf13O54965 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf13O54965 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.51□□□□□ -0.73
Rnf13O54965 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm11793-201ENSMUST00000120433 981 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm7046-201ENSMUST00000221351 977 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.51□□□□□ -0.73
Rnf13O54965 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rnf13O54965 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rnf13O54965 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.51□□□□□ -0.73
Rnf13O54965 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf13O54965 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rnf13O54965 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rnf13O54965 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.5□□□□□ -0.73
Rnf13O54965 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf13O54965 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Rnf13O54965 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf13O54965 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rnf13O54965 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms