Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm24279-201ENSMUST00000104236 131 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm11380-201ENSMUST00000118067 560 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm24943-201ENSMUST00000158329 433 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm27440-201ENSMUST00000184785 107 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm11993-201ENSMUST00000121861 820 ntBASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col4a6B1AVK5 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Mir3060-201ENSMUST00000175339 83 ntBASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Gm7880-201ENSMUST00000203748 871 ntBASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.74□□□□□ -0.53
Col4a6B1AVK5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms