Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm38223-201ENSMUST00000194484 695 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm43703-201ENSMUST00000200523 763 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm19078-201ENSMUST00000206311 727 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.26□□□□□ -0.93
Smco4Q9JIS3 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco4Q9JIS3 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm14767-201ENSMUST00000121559 586 ntBASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.25□□□□□ -0.93
Smco4Q9JIS3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm23363-201ENSMUST00000175024 79 ntBASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm9022-201ENSMUST00000182482 992 ntBASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smco4Q9JIS3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms