Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-4Q9EQM3 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm6158-201ENSMUST00000109467 904 ntBASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-4Q9EQM3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm43506-201ENSMUST00000200675 753 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm9204-201ENSMUST00000212641 947 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms