Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm11989-201ENSMUST00000117240 672 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm11362-201ENSMUST00000118838 850 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm8051-201ENSMUST00000120464 466 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm15258-201ENSMUST00000153801 741 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm28437-201ENSMUST00000190277 783 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm20274-201ENSMUST00000206967 584 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm44559-201ENSMUST00000207177 1012 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm8607-201ENSMUST00000221864 431 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 AC131117.1-201ENSMUST00000225154 1171 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 AC125464.1-201ENSMUST00000228013 512 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Desi2-202ENSMUST00000069568 1193 ntBASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg3Q9CQV4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm12586-201ENSMUST00000117328 1316 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm7857-201ENSMUST00000117957 358 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm11485-201ENSMUST00000120048 1175 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm12566-201ENSMUST00000121479 359 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Mir6374-201ENSMUST00000184003 107 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm19187-201ENSMUST00000206781 892 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm45598-202ENSMUST00000210719 986 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 AC134335.1-201ENSMUST00000227626 329 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg3Q9CQV4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms