Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm9022-201ENSMUST00000182482 992 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm44100-201ENSMUST00000204329 436 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm45525-201ENSMUST00000210800 389 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm4157-201ENSMUST00000211647 679 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm18041-201ENSMUST00000218210 618 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm270-201ENSMUST00000223010 976 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm26448-201ENSMUST00000082446 203 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm26437-201ENSMUST00000082595 105 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Map1b-203ENSMUST00000223725 2669 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Il17rd-205ENSMUST00000226105 2923 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm6580-201ENSMUST00000117504 1357 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm43544-201ENSMUST00000196474 2472 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm9924-202ENSMUST00000192760 2311 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 AC155245.1-201ENSMUST00000222266 1804 ntBASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sec61bQ9CQS8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Sec61bQ9CQS8 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Sec61bQ9CQS8 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Sec61bQ9CQS8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sec61bQ9CQS8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms