Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm12579-201ENSMUST00000118040 783 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm11836-201ENSMUST00000121022 441 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm18367-201ENSMUST00000176139 600 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Mir6923-201ENSMUST00000184592 72 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm8531-201ENSMUST00000188319 893 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Mt1-202ENSMUST00000211807 1085 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm9111-201ENSMUST00000219394 709 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm19009-201ENSMUST00000223072 823 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm25076-201ENSMUST00000104098 132 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm5621-201ENSMUST00000187303 640 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm42779-201ENSMUST00000198807 406 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm18059-201ENSMUST00000208073 580 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm45594-201ENSMUST00000211717 241 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.25□□□□□ -0.77
Scrt1Q99M85 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Scrt1Q99M85 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms