Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhga6Q91XY2 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm14193-201ENSMUST00000105067 153 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm7541-201ENSMUST00000118361 535 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm13022-201ENSMUST00000121181 285 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm5257-201ENSMUST00000121823 790 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm8815-201ENSMUST00000173809 620 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm4654-201ENSMUST00000183305 982 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm18463-201ENSMUST00000207258 474 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga6Q91XY2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm22920-201ENSMUST00000102175 109 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm25063-201ENSMUST00000104666 94 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm8451-201ENSMUST00000170338 447 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm9022-201ENSMUST00000182482 992 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm8956-201ENSMUST00000203939 825 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm45594-201ENSMUST00000211717 241 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm7536-201ENSMUST00000077389 444 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Gm5453-201ENSMUST00000080866 447 ntBASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga6Q91XY2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms