Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm26013-201ENSMUST00000104404 119 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm13937-201ENSMUST00000121000 988 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm23272-201ENSMUST00000104053 129 ntBASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm12247-201ENSMUST00000117585 670 ntBASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm11244-201ENSMUST00000121243 237 ntBASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ddx39aQ8VDW0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx39aQ8VDW0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms