Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Cps1Q8C196 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cps1Q8C196 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cps1Q8C196 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cps1Q8C196 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm12986-201ENSMUST00000119037 967 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm6630-201ENSMUST00000119199 454 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm17796-201ENSMUST00000189015 1213 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm6677-201ENSMUST00000195100 441 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 CT025689.1-201ENSMUST00000225214 283 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 AC105408.1-201ENSMUST00000227771 802 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm42498-201ENSMUST00000199981 1372 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Cps1Q8C196 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cps1Q8C196 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.39■□□□□ 0.05
Cps1Q8C196 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cps1Q8C196 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm44153-201ENSMUST00000204162 1580 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm7985-201ENSMUST00000183329 981 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm43244-201ENSMUST00000196994 1285 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm8234-201ENSMUST00000198523 1107 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm35960-201ENSMUST00000202712 767 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 CT025603.1-201ENSMUST00000224040 448 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cps1Q8C196 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm7880-201ENSMUST00000203748 871 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm10254-201ENSMUST00000052888 867 ntBASIC15.38■□□□□ 0.05
Cps1Q8C196 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cps1Q8C196 Gm5739-201ENSMUST00000208601 1703 ntBASIC15.37■□□□□ 0.05
Cps1Q8C196 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cps1Q8C196 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms