Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4Q8BQZ5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Mir5120-201ENSMUST00000175020 78 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm4607-201ENSMUST00000206649 577 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.3□□□□□ -0.6
Cpsf4Q8BQZ5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Mir5132-201ENSMUST00000175166 71 ntBASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Gm27530-201ENSMUST00000184096 98 ntBASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4Q8BQZ5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cpsf4Q8BQZ5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms