Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Btrc-209ENSMUST00000224478 2194 ntBASIC15.03■□□□□ -0
Col16a1Q8BLX7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.02■□□□□ -0
Col16a1Q8BLX7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col16a1Q8BLX7 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gm42913-201ENSMUST00000197936 1853 ntBASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gm6644-201ENSMUST00000186507 951 ntBASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gm42751-201ENSMUST00000198065 559 ntBASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Gm42499-201ENSMUST00000196193 1412 ntBASIC15.02□□□□□ -0.01
Col16a1Q8BLX7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Snord17-201ENSMUST00000104526 238 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm14052-201ENSMUST00000121434 1031 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Mup-ps29-201ENSMUST00000122281 202 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm24943-201ENSMUST00000158329 433 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm27440-201ENSMUST00000184785 107 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Ighv5-8-202ENSMUST00000191967 337 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm45481-201ENSMUST00000209717 877 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 AC164556.1-201ENSMUST00000221318 751 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 AC137871.1-201ENSMUST00000228278 475 ntBASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col16a1Q8BLX7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms