Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Gm11380-201ENSMUST00000118067 560 ntBASIC16.29■□□□□ 0.2
Usp54Q8BL06 Gm11952-201ENSMUST00000121172 821 ntBASIC16.29■□□□□ 0.2
Usp54Q8BL06 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC16.29■□□□□ 0.2
Usp54Q8BL06 Gm7939-201ENSMUST00000201233 1050 ntBASIC16.29■□□□□ 0.2
Usp54Q8BL06 BC080696-201ENSMUST00000202858 1218 ntBASIC16.29■□□□□ 0.2
Usp54Q8BL06 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Gm9791-201ENSMUST00000060997 447 ntBASIC16.29■□□□□ 0.2
Usp54Q8BL06 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Gm6758-201ENSMUST00000119643 1055 ntBASIC16.28■□□□□ 0.2
Usp54Q8BL06 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Gm27440-201ENSMUST00000184785 107 ntBASIC16.28■□□□□ 0.2
Usp54Q8BL06 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp54Q8BL06 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.28■□□□□ 0.2
Usp54Q8BL06 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp54Q8BL06 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC16.27■□□□□ 0.2
Usp54Q8BL06 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm12745-201ENSMUST00000121767 214 ntBASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm42751-201ENSMUST00000198065 559 ntBASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm7192-201ENSMUST00000210793 1137 ntBASIC16.27■□□□□ 0.2
Usp54Q8BL06 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC16.27■□□□□ 0.2
Usp54Q8BL06 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Usp54Q8BL06 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp54Q8BL06 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp54Q8BL06 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp54Q8BL06 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC16.26■□□□□ 0.19
Usp54Q8BL06 Gm5944-201ENSMUST00000118182 1001 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp54Q8BL06 Gm23675-201ENSMUST00000157311 125 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 Gm26119-201ENSMUST00000175601 104 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 Gm11942-201ENSMUST00000180255 345 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 Gm7069-201ENSMUST00000182418 1008 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp54Q8BL06 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp54Q8BL06 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp54Q8BL06 AC156790.2-201ENSMUST00000227115 568 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 AC137871.1-201ENSMUST00000228278 475 ntBASIC16.26■□□□□ 0.19
Usp54Q8BL06 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms