Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm26286-201ENSMUST00000104166 134 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm8199-201ENSMUST00000121323 823 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm9358-201ENSMUST00000183067 927 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm35960-201ENSMUST00000202712 767 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm9132-201ENSMUST00000210182 832 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.2□□□□□ -0.62
SynbQ8BI41 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SynbQ8BI41 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm27390-201ENSMUST00000184516 176 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm9463-201ENSMUST00000206707 601 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.19□□□□□ -0.62
SynbQ8BI41 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SynbQ8BI41 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SynbQ8BI41 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SynbQ8BI41 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SynbQ8BI41 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SynbQ8BI41 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.18□□□□□ -0.62
SynbQ8BI41 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 144.2 ms