Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm9136-201ENSMUST00000193368 454 ntBASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox11Q7M6Y2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox11Q7M6Y2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox11Q7M6Y2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox11Q7M6Y2 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox11Q7M6Y2 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm7902-201ENSMUST00000198842 947 ntBASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox11Q7M6Y2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm12419-201ENSMUST00000116649 636 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm13549-201ENSMUST00000118339 796 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm13022-201ENSMUST00000121181 285 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm25545-201ENSMUST00000122673 323 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm4862-201ENSMUST00000170405 438 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm6722-201ENSMUST00000221586 390 ntBASIC11.82□□□□□ -0.52
Sox11Q7M6Y2 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms