Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm11960-202ENSMUST00000181063 2858 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm14113-201ENSMUST00000121399 976 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm26272-201ENSMUST00000179241 132 ntBASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.88□□□□□ -0.83
Rif1Q6PR54 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm14048-201ENSMUST00000121864 1268 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm8464-202ENSMUST00000146697 1142 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm4750-201ENSMUST00000151942 1142 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm16560-201ENSMUST00000159115 404 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 CU025215.1-201ENSMUST00000222986 603 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm24466-201ENSMUST00000179978 109 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm26931-201ENSMUST00000182273 609 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.87□□□□□ -0.83
Rif1Q6PR54 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rif1Q6PR54 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rif1Q6PR54 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rif1Q6PR54 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms