Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
ClpbQ60649 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.2□□□□□ -0.62
ClpbQ60649 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm12196-201ENSMUST00000120954 262 ntBASIC11.2□□□□□ -0.62
ClpbQ60649 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.2□□□□□ -0.62
ClpbQ60649 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm25881-201ENSMUST00000157783 103 ntBASIC11.2□□□□□ -0.62
ClpbQ60649 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm18893-201ENSMUST00000198416 943 ntBASIC11.2□□□□□ -0.62
ClpbQ60649 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
ClpbQ60649 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.2□□□□□ -0.62
ClpbQ60649 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
ClpbQ60649 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.2□□□□□ -0.62
ClpbQ60649 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ClpbQ60649 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.2□□□□□ -0.62
ClpbQ60649 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ClpbQ60649 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ClpbQ60649 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
ClpbQ60649 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
ClpbQ60649 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.19□□□□□ -0.62
ClpbQ60649 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.19□□□□□ -0.62
ClpbQ60649 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ClpbQ60649 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.19□□□□□ -0.62
ClpbQ60649 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ClpbQ60649 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.19□□□□□ -0.62
ClpbQ60649 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Gm11660-201ENSMUST00000120955 412 ntBASIC11.19□□□□□ -0.62
ClpbQ60649 Gm11450-201ENSMUST00000121144 333 ntBASIC11.19□□□□□ -0.62
ClpbQ60649 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.19□□□□□ -0.62
ClpbQ60649 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
ClpbQ60649 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.19□□□□□ -0.62
ClpbQ60649 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
ClpbQ60649 Gm7848-201ENSMUST00000210739 718 ntBASIC11.19□□□□□ -0.62
ClpbQ60649 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ClpbQ60649 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.19□□□□□ -0.62
ClpbQ60649 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.19□□□□□ -0.62
ClpbQ60649 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClpbQ60649 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.18□□□□□ -0.62
ClpbQ60649 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
ClpbQ60649 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
ClpbQ60649 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClpbQ60649 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms