Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Gm23045-201ENSMUST00000175041 96 ntBASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.95□□□□□ -0.18
Vps54Q5SPW0 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps54Q5SPW0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm14585-201ENSMUST00000120713 634 ntBASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm19459-201ENSMUST00000176240 835 ntBASIC13.94□□□□□ -0.18
Vps54Q5SPW0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps54Q5SPW0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12247-201ENSMUST00000117585 670 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12616-201ENSMUST00000118594 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12624-201ENSMUST00000177615 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12621-201ENSMUST00000177760 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12615-201ENSMUST00000177970 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12622-201ENSMUST00000177975 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12627-201ENSMUST00000178412 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12625-201ENSMUST00000179122 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12614-201ENSMUST00000179586 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm12613-201ENSMUST00000180323 382 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps54Q5SPW0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms