Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Nudt13-207ENSMUST00000224311 1574 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm45546-201ENSMUST00000211053 2394 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm8577-201ENSMUST00000122420 986 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm5501-201ENSMUST00000165917 832 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm15363-201ENSMUST00000118897 631 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm22481-201ENSMUST00000122562 192 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 AC160109.1-201ENSMUST00000225592 729 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 AC134793.1-202ENSMUST00000227444 803 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm5472-201ENSMUST00000178604 1678 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm12420-201ENSMUST00000119869 1048 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Herc2Q4U2R1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Paupar-201ENSMUST00000194826 3482 ntBASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Gm18443-201ENSMUST00000185358 556 ntBASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Gm28281-201ENSMUST00000185658 187 ntBASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Gm14005-209ENSMUST00000224993 1832 ntBASIC6.65□□□□□ -1.34
Herc2Q4U2R1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Herc2Q4U2R1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms