Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fam196aQ3USH1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm16305-201ENSMUST00000140747 556 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm24078-201ENSMUST00000158184 103 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm6612-201ENSMUST00000170777 395 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm26976-201ENSMUST00000182929 908 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm5996-201ENSMUST00000211110 718 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.75□□□□□ -0.53
Fam196aQ3USH1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fam196aQ3USH1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm23595-201ENSMUST00000104306 130 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm12418-201ENSMUST00000118116 942 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm16219-201ENSMUST00000120096 274 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm2345-201ENSMUST00000193451 589 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm17825-201ENSMUST00000206836 794 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm8255-201ENSMUST00000218693 305 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Capsl-202ENSMUST00000226688 739 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm4978-201ENSMUST00000071565 801 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Gm6564-201ENSMUST00000075377 619 ntBASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Fam196aQ3USH1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms