Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm14639-201ENSMUST00000120850 866 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm24992-201ENSMUST00000157412 130 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm28180-201ENSMUST00000189608 722 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm38301-201ENSMUST00000195573 543 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gm44908-201ENSMUST00000208610 266 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Spg11Q3UHA3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.67□□□□□ -0.7
Spg11Q3UHA3 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Spg11Q3UHA3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm15528-201ENSMUST00000117821 864 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm14630-201ENSMUST00000118057 246 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm12240-201ENSMUST00000120178 229 ntBASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Spg11Q3UHA3 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms