Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm13047-201ENSMUST00000117116 815 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm13351-201ENSMUST00000118087 414 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm9133-201ENSMUST00000118289 540 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm11578-201ENSMUST00000118530 459 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm3828-201ENSMUST00000121817 257 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm22146-201ENSMUST00000157397 288 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm37284-201ENSMUST00000193607 539 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm18204-201ENSMUST00000209835 793 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Id2-203ENSMUST00000222667 958 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.57□□□□□ -0.08
Nkx2-3P97334 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-3P97334 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Mir671-201ENSMUST00000102432 98 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm12274-201ENSMUST00000120062 385 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm12453-201ENSMUST00000121981 331 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm24809-201ENSMUST00000175318 271 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx2-3P97334 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx2-3P97334 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.56□□□□□ -0.08
Nkx2-3P97334 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-3P97334 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.55□□□□□ -0.08
Nkx2-3P97334 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Gm25562-201ENSMUST00000104608 133 ntBASIC14.55□□□□□ -0.08
Nkx2-3P97334 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.55□□□□□ -0.08
Nkx2-3P97334 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms