Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SgcaP82350 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.77□□□□□ -0.85
SgcaP82350 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.77□□□□□ -0.85
SgcaP82350 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.77□□□□□ -0.85
SgcaP82350 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
SgcaP82350 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SgcaP82350 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm14928-201ENSMUST00000120198 477 ntBASIC9.76□□□□□ -0.85
SgcaP82350 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.76□□□□□ -0.85
SgcaP82350 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm6745-201ENSMUST00000199216 526 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Gm43002-201ENSMUST00000200310 155 ntBASIC9.76□□□□□ -0.85
SgcaP82350 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm6180-201ENSMUST00000065243 498 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SgcaP82350 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SgcaP82350 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SgcaP82350 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.76□□□□□ -0.85
SgcaP82350 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.76□□□□□ -0.85
SgcaP82350 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
SgcaP82350 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcaP82350 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SgcaP82350 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.75□□□□□ -0.85
SgcaP82350 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.75□□□□□ -0.85
SgcaP82350 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.75□□□□□ -0.85
SgcaP82350 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcaP82350 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms