Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Lmo4P61969 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.39□□□□□ -0.91
Lmo4P61969 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm10169-201ENSMUST00000121822 348 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.39□□□□□ -0.91
Lmo4P61969 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm6407-201ENSMUST00000176468 549 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm23694-201ENSMUST00000179335 110 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.39□□□□□ -0.91
Lmo4P61969 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Lmo4P61969 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC9.39□□□□□ -0.91
Lmo4P61969 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lmo4P61969 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lmo4P61969 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lmo4P61969 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.38□□□□□ -0.91
Lmo4P61969 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
Lmo4P61969 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm12030-201ENSMUST00000121917 223 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm25554-201ENSMUST00000158075 113 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Mir7051-201ENSMUST00000184167 73 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Gm8197-202ENSMUST00000193422 934 ntBASIC9.38□□□□□ -0.91
Lmo4P61969 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Lmo4P61969 Gm43380-201ENSMUST00000200421 220 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms