Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tpm1P58771 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.97□□□□□ -0.33
Tpm1P58771 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.97□□□□□ -0.33
Tpm1P58771 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.97□□□□□ -0.33
Tpm1P58771 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.97□□□□□ -0.33
Tpm1P58771 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.97□□□□□ -0.33
Tpm1P58771 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.97□□□□□ -0.33
Tpm1P58771 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tpm1P58771 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tpm1P58771 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.97□□□□□ -0.33
Tpm1P58771 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Tpm1P58771 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.97□□□□□ -0.33
Tpm1P58771 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.97□□□□□ -0.33
Tpm1P58771 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.97□□□□□ -0.33
Tpm1P58771 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tpm1P58771 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.96□□□□□ -0.33
Tpm1P58771 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Tpm1P58771 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Gm6023-201ENSMUST00000118217 606 ntBASIC12.96□□□□□ -0.33
Tpm1P58771 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.96□□□□□ -0.33
Tpm1P58771 Gm25043-201ENSMUST00000158604 212 ntBASIC12.96□□□□□ -0.33
Tpm1P58771 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.96□□□□□ -0.33
Tpm1P58771 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.96□□□□□ -0.33
Tpm1P58771 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tpm1P58771 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.96□□□□□ -0.33
Tpm1P58771 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.96□□□□□ -0.33
Tpm1P58771 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tpm1P58771 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tpm1P58771 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tpm1P58771 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tpm1P58771 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tpm1P58771 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tpm1P58771 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tpm1P58771 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Tpm1P58771 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tpm1P58771 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tpm1P58771 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tpm1P58771 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tpm1P58771 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.95□□□□□ -0.34
Tpm1P58771 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.95□□□□□ -0.34
Tpm1P58771 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.95□□□□□ -0.34
Tpm1P58771 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.95□□□□□ -0.34
Tpm1P58771 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Tpm1P58771 Gm12390-201ENSMUST00000117897 397 ntBASIC12.95□□□□□ -0.34
Tpm1P58771 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.95□□□□□ -0.34
Tpm1P58771 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.95□□□□□ -0.34
Tpm1P58771 Gm807-202ENSMUST00000224929 408 ntBASIC12.95□□□□□ -0.34
Tpm1P58771 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tpm1P58771 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tpm1P58771 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms