Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Sssca1P56873 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.39□□□□□ -0.91
Sssca1P56873 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sssca1P56873 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sssca1P56873 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sssca1P56873 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sssca1P56873 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm11531-201ENSMUST00000117614 555 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm9230-201ENSMUST00000188228 532 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm10254-201ENSMUST00000052888 867 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Gm10312-201ENSMUST00000078515 489 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Sssca1P56873 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sssca1P56873 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Sssca1P56873 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Sssca1P56873 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.38□□□□□ -0.91
Sssca1P56873 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sssca1P56873 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.37□□□□□ -0.91
Sssca1P56873 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Gm22018-201ENSMUST00000104357 131 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.37□□□□□ -0.91
Sssca1P56873 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sssca1P56873 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms