Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm14807-201ENSMUST00000116640 983 ntBASIC11.62□□□□□ -0.55
Atxn1P54254 Gm13019-201ENSMUST00000120000 276 ntBASIC11.62□□□□□ -0.55
Atxn1P54254 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Gm8815-201ENSMUST00000173809 620 ntBASIC11.62□□□□□ -0.55
Atxn1P54254 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.62□□□□□ -0.55
Atxn1P54254 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.62□□□□□ -0.55
Atxn1P54254 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Atxn1P54254 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.62□□□□□ -0.55
Atxn1P54254 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atxn1P54254 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm15003-201ENSMUST00000118884 446 ntBASIC11.61□□□□□ -0.55
Atxn1P54254 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.61□□□□□ -0.55
Atxn1P54254 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Atxn1P54254 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atxn1P54254 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.61□□□□□ -0.55
Atxn1P54254 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm42511-201ENSMUST00000196160 234 ntBASIC11.61□□□□□ -0.55
Atxn1P54254 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm40879-201ENSMUST00000220759 612 ntBASIC11.61□□□□□ -0.55
Atxn1P54254 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.61□□□□□ -0.55
Atxn1P54254 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.61□□□□□ -0.55
Atxn1P54254 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Map1b-203ENSMUST00000223725 2669 ntBASIC11.61□□□□□ -0.55
Atxn1P54254 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atxn1P54254 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Atxn1P54254 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Atxn1P54254 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.6□□□□□ -0.55
Atxn1P54254 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.6□□□□□ -0.55
Atxn1P54254 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atxn1P54254 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atxn1P54254 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.6□□□□□ -0.55
Atxn1P54254 Gm14760-201ENSMUST00000121831 999 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.6□□□□□ -0.55
Atxn1P54254 Gm18367-201ENSMUST00000176139 600 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Gm29763-201ENSMUST00000205306 616 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.6□□□□□ -0.55
Atxn1P54254 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.6□□□□□ -0.55
Atxn1P54254 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atxn1P54254 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Atxn1P54254 Gm5705-201ENSMUST00000066241 711 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms