Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox1P53783 Gm22937-201ENSMUST00000103954 131 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Gm9095-201ENSMUST00000117607 881 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Gm9097-201ENSMUST00000120514 880 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Gm15197-201ENSMUST00000120526 478 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.93□□□□□ -0.5
Sox1P53783 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Gm9372-201ENSMUST00000168454 430 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Mir7088-201ENSMUST00000184227 86 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox1P53783 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.93□□□□□ -0.5
Sox1P53783 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox1P53783 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox1P53783 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox1P53783 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Sox1P53783 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Sox1P53783 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Sox1P53783 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox1P53783 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Sox1P53783 Gm14006-201ENSMUST00000122132 981 ntBASIC11.92□□□□□ -0.5
Sox1P53783 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox1P53783 Gm23582-201ENSMUST00000158530 139 ntBASIC11.92□□□□□ -0.5
Sox1P53783 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.92□□□□□ -0.5
Sox1P53783 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox1P53783 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox1P53783 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Sox1P53783 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Mir341-201ENSMUST00000093593 96 ntBASIC11.92□□□□□ -0.5
Sox1P53783 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sox1P53783 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.92□□□□□ -0.5
Sox1P53783 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox1P53783 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox1P53783 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox1P53783 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox1P53783 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.91□□□□□ -0.5
Sox1P53783 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox1P53783 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.91□□□□□ -0.5
Sox1P53783 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.91□□□□□ -0.5
Sox1P53783 Mir6387-201ENSMUST00000184042 108 ntBASIC11.91□□□□□ -0.5
Sox1P53783 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.91□□□□□ -0.5
Sox1P53783 Gm31274-201ENSMUST00000197356 229 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms