Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Krt6aP50446 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Gm14726-201ENSMUST00000120623 896 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Gm27046-201ENSMUST00000182160 463 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 Gm5745-201ENSMUST00000183748 313 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 Gm2553-201ENSMUST00000215986 605 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Krt6aP50446 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.53□□□□□ -0.56
Krt6aP50446 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Krt6aP50446 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt6aP50446 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt6aP50446 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Krt6aP50446 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.56
Krt6aP50446 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt6aP50446 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Krt6aP50446 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt6aP50446 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Krt6aP50446 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Krt6aP50446 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.52□□□□□ -0.57
Krt6aP50446 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Krt6aP50446 Gm14109-201ENSMUST00000118814 309 ntBASIC11.52□□□□□ -0.57
Krt6aP50446 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.52□□□□□ -0.57
Krt6aP50446 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.52□□□□□ -0.57
Krt6aP50446 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 Gm43962-201ENSMUST00000203898 190 ntBASIC11.52□□□□□ -0.57
Krt6aP50446 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 Gm18065-201ENSMUST00000221395 526 ntBASIC11.52□□□□□ -0.57
Krt6aP50446 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Krt6aP50446 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt6aP50446 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.51□□□□□ -0.57
Krt6aP50446 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Krt6aP50446 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.51□□□□□ -0.57
Krt6aP50446 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.51□□□□□ -0.57
Krt6aP50446 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.51□□□□□ -0.57
Krt6aP50446 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt6aP50446 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms