Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LmnaP48678 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
LmnaP48678 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.27□□□□□ -0.45
LmnaP48678 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LmnaP48678 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Gm22138-201ENSMUST00000158748 128 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LmnaP48678 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LmnaP48678 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm9022-201ENSMUST00000182482 992 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Mir6998-201ENSMUST00000183343 64 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm5621-201ENSMUST00000187303 640 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Gm19091-201ENSMUST00000208120 978 ntBASIC12.27□□□□□ -0.45
LmnaP48678 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm19540-201ENSMUST00000221843 810 ntBASIC12.27□□□□□ -0.45
LmnaP48678 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.27□□□□□ -0.45
LmnaP48678 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
LmnaP48678 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.27□□□□□ -0.45
LmnaP48678 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.27□□□□□ -0.45
LmnaP48678 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LmnaP48678 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LmnaP48678 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm12516-201ENSMUST00000120819 385 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Gm25545-201ENSMUST00000122673 323 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Gm22442-201ENSMUST00000157256 144 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Gm25881-201ENSMUST00000157783 103 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Gm23218-201ENSMUST00000158124 276 ntBASIC12.26□□□□□ -0.45
LmnaP48678 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm4482-201ENSMUST00000200876 742 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.26□□□□□ -0.45
LmnaP48678 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
LmnaP48678 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.26□□□□□ -0.45
LmnaP48678 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LmnaP48678 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LmnaP48678 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LmnaP48678 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LmnaP48678 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.25□□□□□ -0.45
LmnaP48678 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms