Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Gm24791-201ENSMUST00000104284 131 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.43□□□□□ -0.58
Sox18P43680 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Sox18P43680 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox18P43680 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox18P43680 Gm22094-201ENSMUST00000158976 117 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.43□□□□□ -0.58
Sox18P43680 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Gm9135-201ENSMUST00000182963 990 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.43□□□□□ -0.58
Sox18P43680 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sox18P43680 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Gm17838-201ENSMUST00000205872 876 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.43□□□□□ -0.58
Sox18P43680 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox18P43680 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sox18P43680 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox18P43680 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.43□□□□□ -0.58
Sox18P43680 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Sox18P43680 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Gm22711-201ENSMUST00000116890 133 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Gm6630-201ENSMUST00000119199 454 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox18P43680 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Gm37355-201ENSMUST00000193345 606 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Gm5717-201ENSMUST00000198243 1062 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.42□□□□□ -0.58
Sox18P43680 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Sox18P43680 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.42□□□□□ -0.58
Sox18P43680 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Sox18P43680 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox18P43680 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms