Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Sox6P40645 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.96□□□□□ -0.66
Sox6P40645 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sox6P40645 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Sox6P40645 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Sox6P40645 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.96□□□□□ -0.66
Sox6P40645 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox6P40645 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Sox6P40645 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.95□□□□□ -0.66
Sox6P40645 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.95□□□□□ -0.66
Sox6P40645 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.95□□□□□ -0.66
Sox6P40645 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox6P40645 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Gm15276-201ENSMUST00000145953 498 ntBASIC10.95□□□□□ -0.66
Sox6P40645 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox6P40645 Gm9230-201ENSMUST00000188228 532 ntBASIC10.95□□□□□ -0.66
Sox6P40645 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Gm13097-201ENSMUST00000210722 397 ntBASIC10.95□□□□□ -0.66
Sox6P40645 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox6P40645 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox6P40645 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sox6P40645 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox6P40645 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Sox6P40645 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox6P40645 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox6P40645 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Gm37259-201ENSMUST00000193903 849 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox6P40645 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox6P40645 Gm44651-201ENSMUST00000207343 372 ntBASIC10.94□□□□□ -0.66
Sox6P40645 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox6P40645 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms