Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm15004-201ENSMUST00000119192 630 ntBASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 AA914427-201ENSMUST00000193194 1166 ntBASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm5705-201ENSMUST00000066241 711 ntBASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Tnfrsf1aP25118 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm26286-201ENSMUST00000104166 134 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm11960-201ENSMUST00000122068 925 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm26361-201ENSMUST00000158868 186 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm25700-201ENSMUST00000177693 110 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm38317-201ENSMUST00000195564 343 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Gm17827-201ENSMUST00000211825 742 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Tnfrsf1aP25118 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms