Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.79□□□□□ -0.36
Pde6bP23440 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Pde6bP23440 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pde6bP23440 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pde6bP23440 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.78□□□□□ -0.36
Pde6bP23440 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pde6bP23440 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Gm16397-201ENSMUST00000122201 494 ntBASIC12.78□□□□□ -0.36
Pde6bP23440 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.78□□□□□ -0.36
Pde6bP23440 Gm38210-201ENSMUST00000191944 809 ntBASIC12.78□□□□□ -0.36
Pde6bP23440 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.78□□□□□ -0.36
Pde6bP23440 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6bP23440 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Pde6bP23440 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.77□□□□□ -0.36
Pde6bP23440 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pde6bP23440 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Pde6bP23440 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pde6bP23440 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6bP23440 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Gm1848-201ENSMUST00000120711 789 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 Gm11836-201ENSMUST00000121022 441 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pde6bP23440 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.77□□□□□ -0.37
Pde6bP23440 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Mir8115-201ENSMUST00000184992 119 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 Gm17931-201ENSMUST00000208132 634 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.77□□□□□ -0.37
Pde6bP23440 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pde6bP23440 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.77□□□□□ -0.37
Pde6bP23440 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6bP23440 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms