Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.69□□□□□ -0.38
Chmp6P0C0A3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp6P0C0A3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm12501-201ENSMUST00000119163 529 ntBASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp6P0C0A3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms