Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxb3P09026 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm11619-201ENSMUST00000117474 237 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm14724-201ENSMUST00000118400 537 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm13445-201ENSMUST00000121664 307 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm9499-201ENSMUST00000180888 964 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm4034-201ENSMUST00000187674 480 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm8956-201ENSMUST00000203939 825 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm44760-201ENSMUST00000206375 1173 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 AC158981.3-201ENSMUST00000226844 1024 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.84□□□□□ -0.51
Hoxb3P09026 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hoxb3P09026 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxb3P09026 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Hoxb3P09026 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Hoxb3P09026 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm13192-201ENSMUST00000101199 208 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm10443-201ENSMUST00000119024 210 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Gm8199-201ENSMUST00000121323 823 ntBASIC11.83□□□□□ -0.52
Hoxb3P09026 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms