Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hps1O08983 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.9□□□□□ -0.66
Hps1O08983 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hps1O08983 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.89□□□□□ -0.67
Hps1O08983 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Hps1O08983 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 AU022133-201ENSMUST00000200601 873 ntBASIC10.89□□□□□ -0.67
Hps1O08983 Gm5904-201ENSMUST00000210286 865 ntBASIC10.89□□□□□ -0.67
Hps1O08983 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.89□□□□□ -0.67
Hps1O08983 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.89□□□□□ -0.67
Hps1O08983 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
Hps1O08983 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.89□□□□□ -0.67
Hps1O08983 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hps1O08983 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hps1O08983 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hps1O08983 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hps1O08983 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Hps1O08983 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.88□□□□□ -0.67
Hps1O08983 Gm7857-201ENSMUST00000117957 358 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12616-201ENSMUST00000118594 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12217-201ENSMUST00000118858 696 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hps1O08983 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.88□□□□□ -0.67
Hps1O08983 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Gm12624-201ENSMUST00000177615 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12621-201ENSMUST00000177760 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12615-201ENSMUST00000177970 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12622-201ENSMUST00000177975 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12627-201ENSMUST00000178412 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12625-201ENSMUST00000179122 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12614-201ENSMUST00000179586 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm12613-201ENSMUST00000180323 382 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm38317-201ENSMUST00000195564 343 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm44967-201ENSMUST00000207047 631 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.88□□□□□ -0.67
Hps1O08983 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.88□□□□□ -0.67
Hps1O08983 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.88□□□□□ -0.67
Hps1O08983 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hps1O08983 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.88□□□□□ -0.67
Hps1O08983 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.88□□□□□ -0.67
Hps1O08983 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Hps1O08983 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hps1O08983 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms