Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.07□□□□□ -0.16
NpcdF8VQB8 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NpcdF8VQB8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Mir744-201ENSMUST00000103261 100 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm9166-201ENSMUST00000120293 561 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm15610-201ENSMUST00000120584 195 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm13981-201ENSMUST00000122360 447 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Mir1905-201ENSMUST00000122779 82 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm8459-201ENSMUST00000162504 760 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Mir6973a-201ENSMUST00000183646 78 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm42430-201ENSMUST00000197209 616 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.06□□□□□ -0.16
NpcdF8VQB8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NpcdF8VQB8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm16459-201ENSMUST00000121443 686 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm26047-201ENSMUST00000157308 113 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm43163-201ENSMUST00000196571 442 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm26047-202ENSMUST00000198840 115 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.05□□□□□ -0.16
NpcdF8VQB8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NpcdF8VQB8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NpcdF8VQB8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms