Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TprF6ZDS4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.78□□□□□ -0.68
TprF6ZDS4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TprF6ZDS4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
TprF6ZDS4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
TprF6ZDS4 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.77□□□□□ -0.68
TprF6ZDS4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
TprF6ZDS4 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TprF6ZDS4 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TprF6ZDS4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.77□□□□□ -0.68
TprF6ZDS4 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
TprF6ZDS4 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.77□□□□□ -0.68
TprF6ZDS4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.77□□□□□ -0.68
TprF6ZDS4 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TprF6ZDS4 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TprF6ZDS4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.77□□□□□ -0.68
TprF6ZDS4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
TprF6ZDS4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Gm8815-201ENSMUST00000173809 620 ntBASIC10.77□□□□□ -0.69
TprF6ZDS4 Gm39288-201ENSMUST00000210554 446 ntBASIC10.77□□□□□ -0.69
TprF6ZDS4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.77□□□□□ -0.69
TprF6ZDS4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TprF6ZDS4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm25076-201ENSMUST00000104098 132 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 AA623943-201ENSMUST00000121794 354 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.76□□□□□ -0.69
TprF6ZDS4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm11619-201ENSMUST00000117474 237 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm37851-201ENSMUST00000193871 889 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm30671-201ENSMUST00000214898 318 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Gm5451-201ENSMUST00000080545 579 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.76□□□□□ -0.69
TprF6ZDS4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TprF6ZDS4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TprF6ZDS4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TprF6ZDS4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TprF6ZDS4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TprF6ZDS4 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TprF6ZDS4 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms