Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Rubie-203ENSMUST00000227803 2430 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm14071-201ENSMUST00000117817 509 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm16166-201ENSMUST00000118291 787 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm14585-201ENSMUST00000120713 634 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm8737-201ENSMUST00000122208 642 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm20495-201ENSMUST00000173902 235 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm8574-201ENSMUST00000203207 924 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm44126-201ENSMUST00000204831 514 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm18065-201ENSMUST00000221395 526 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
U2af1Q9D883 Gm19817-201ENSMUST00000199764 2132 ntBASIC15.31■□□□□ 0.04
U2af1Q9D883 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
U2af1Q9D883 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm15131-201ENSMUST00000119124 595 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.3■□□□□ 0.04
U2af1Q9D883 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm43174-201ENSMUST00000195914 2445 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm7504-201ENSMUST00000201449 424 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Gm45398-201ENSMUST00000210561 165 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Olfr584-201ENSMUST00000098210 964 ntBASIC15.3■□□□□ 0.04
U2af1Q9D883 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
U2af1Q9D883 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
U2af1Q9D883 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm44806-201ENSMUST00000205574 2303 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 AC166574.4-201ENSMUST00000227165 1937 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm43051-201ENSMUST00000201096 2678 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm12419-201ENSMUST00000116649 636 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms