Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm8885-201ENSMUST00000189382 598 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm38266-201ENSMUST00000194931 421 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm43822-201ENSMUST00000200285 476 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm21769-201ENSMUST00000211922 111 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gm24255-201ENSMUST00000104481 128 ntBASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gm15198-201ENSMUST00000117283 177 ntBASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gm45598-202ENSMUST00000210719 986 ntBASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp4cQ9D7F7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Gm17376-201ENSMUST00000166016 84 ntBASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp4cQ9D7F7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms