Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm7741-201ENSMUST00000181445 989 ntBASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm23680-201ENSMUST00000083162 164 ntBASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Matn2-203ENSMUST00000226766 3252 ntBASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stag1Q9D3E6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.9□□□□□ -0.18
Stag1Q9D3E6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Stag1Q9D3E6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Stag1Q9D3E6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Gm25766-201ENSMUST00000104101 131 ntBASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Gm12247-201ENSMUST00000117585 670 ntBASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.89□□□□□ -0.19
Stag1Q9D3E6 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.89□□□□□ -0.19
Stag1Q9D3E6 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms