Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm38314-201ENSMUST00000195709 625 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.06□□□□□ -0.48
SncaipQ99ME3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SncaipQ99ME3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.05□□□□□ -0.48
SncaipQ99ME3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 AU022133-201ENSMUST00000200601 873 ntBASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.05□□□□□ -0.48
SncaipQ99ME3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.05□□□□□ -0.48
SncaipQ99ME3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.05□□□□□ -0.48
SncaipQ99ME3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SncaipQ99ME3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms