Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.96□□□□□ -0.34
Ddx39aQ8VDW0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx39aQ8VDW0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Gm15782-201ENSMUST00000121073 445 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Mir1956-201ENSMUST00000157748 65 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Gm25072-201ENSMUST00000175233 235 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Mir6998-201ENSMUST00000183343 64 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Gm28388-201ENSMUST00000186262 437 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Gm4978-201ENSMUST00000071565 801 ntBASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx39aQ8VDW0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm11960-201ENSMUST00000122068 925 ntBASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm8194-201ENSMUST00000159783 859 ntBASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm10807-201ENSMUST00000177134 795 ntBASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm38210-201ENSMUST00000191944 809 ntBASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Gm23105-201ENSMUST00000083719 134 ntBASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx39aQ8VDW0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx39aQ8VDW0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms