Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.92□□□□□ -0.66
Lin28aQ8K3Y3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12616-201ENSMUST00000118594 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12624-201ENSMUST00000177615 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12621-201ENSMUST00000177760 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12615-201ENSMUST00000177970 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12622-201ENSMUST00000177975 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12627-201ENSMUST00000178412 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12625-201ENSMUST00000179122 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12614-201ENSMUST00000179586 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm12613-201ENSMUST00000180323 382 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm38151-201ENSMUST00000195085 289 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm44126-201ENSMUST00000204831 514 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm7940-201ENSMUST00000218195 769 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lin28aQ8K3Y3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms