Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sfr1Q8BP27 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm14724-201ENSMUST00000118400 537 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm6114-201ENSMUST00000182472 968 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm21811-201ENSMUST00000096485 930 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.96□□□□□ -0.49
Sfr1Q8BP27 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sfr1Q8BP27 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm23200-201ENSMUST00000104379 132 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm11663-201ENSMUST00000117888 290 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm12501-201ENSMUST00000119163 529 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm14441-201ENSMUST00000121960 540 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm28686-201ENSMUST00000187404 609 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Gm2965-201ENSMUST00000198365 343 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sfr1Q8BP27 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.94□□□□□ -0.5
Sfr1Q8BP27 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sfr1Q8BP27 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sfr1Q8BP27 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms