Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.62□□□□□ -0.71
VcanQ62059 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
VcanQ62059 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.62□□□□□ -0.71
VcanQ62059 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Gm5191-201ENSMUST00000222882 1236 ntBASIC10.62□□□□□ -0.71
VcanQ62059 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
VcanQ62059 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VcanQ62059 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.61□□□□□ -0.71
VcanQ62059 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.61□□□□□ -0.71
VcanQ62059 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm11191-201ENSMUST00000117231 610 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm5982-201ENSMUST00000196234 512 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Gm6794-201ENSMUST00000203829 457 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC10.61□□□□□ -0.71
VcanQ62059 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 AC161374.2-201ENSMUST00000223662 596 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm15329-201ENSMUST00000121408 155 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm26119-201ENSMUST00000175601 104 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC10.61□□□□□ -0.71
VcanQ62059 Gm23694-201ENSMUST00000179335 110 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Gm22616-201ENSMUST00000179783 100 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.61□□□□□ -0.71
VcanQ62059 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.61□□□□□ -0.71
VcanQ62059 Tspy-ps-203ENSMUST00000186546 989 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
VcanQ62059 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC10.61□□□□□ -0.71
VcanQ62059 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.61□□□□□ -0.71
VcanQ62059 Gm9102-201ENSMUST00000219250 465 ntBASIC10.61□□□□□ -0.71
VcanQ62059 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.61□□□□□ -0.71
VcanQ62059 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.61□□□□□ -0.71
VcanQ62059 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
VcanQ62059 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
VcanQ62059 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VcanQ62059 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Gm23908-201ENSMUST00000104599 132 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.6□□□□□ -0.71
VcanQ62059 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC10.6□□□□□ -0.71
VcanQ62059 Gm26379-201ENSMUST00000178125 138 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
VcanQ62059 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Gm40332-201ENSMUST00000199847 938 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Gm8730-201ENSMUST00000076373 954 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 AU015228-201ENSMUST00000121103 1320 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.6□□□□□ -0.71
VcanQ62059 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
VcanQ62059 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VcanQ62059 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms