Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trav3-3Q5R1C3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Tmem184b-205ENSMUST00000228002 3315 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm7488-201ENSMUST00000117148 684 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm11618-201ENSMUST00000117946 267 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm8213-201ENSMUST00000118191 441 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Mir6977-201ENSMUST00000184960 64 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm44855-201ENSMUST00000205725 362 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm6218-201ENSMUST00000219812 628 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 AC158777.1-201ENSMUST00000226216 1724 ntBASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav3-3Q5R1C3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Btrc-206ENSMUST00000224102 3037 ntBASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav3-3Q5R1C3 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms