Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.75□□□□□ -0.53
Pfdn6Q03958 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm22323-201ENSMUST00000103832 109 ntBASIC11.75□□□□□ -0.53
Pfdn6Q03958 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm14130-201ENSMUST00000118417 987 ntBASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm15004-201ENSMUST00000119192 630 ntBASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm13350-201ENSMUST00000120519 479 ntBASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm8343-201ENSMUST00000182705 994 ntBASIC11.75□□□□□ -0.53
Pfdn6Q03958 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pfdn6Q03958 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.74□□□□□ -0.53
Pfdn6Q03958 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Mir7677-201ENSMUST00000184226 67 ntBASIC11.74□□□□□ -0.53
Pfdn6Q03958 Gm37259-201ENSMUST00000193903 849 ntBASIC11.74□□□□□ -0.53
Pfdn6Q03958 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.74□□□□□ -0.53
Pfdn6Q03958 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.74□□□□□ -0.53
Pfdn6Q03958 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn6Q03958 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms