Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SgcaP82350 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.78□□□□□ -0.84
SgcaP82350 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.78□□□□□ -0.84
SgcaP82350 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SgcaP82350 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.78□□□□□ -0.84
SgcaP82350 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SgcaP82350 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SgcaP82350 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Gm11918-201ENSMUST00000121660 179 ntBASIC9.78□□□□□ -0.84
SgcaP82350 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.78□□□□□ -0.84
SgcaP82350 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.78□□□□□ -0.84
SgcaP82350 Gm23984-201ENSMUST00000157139 203 ntBASIC9.78□□□□□ -0.84
SgcaP82350 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.78□□□□□ -0.84
SgcaP82350 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SgcaP82350 Gm29705-201ENSMUST00000212598 474 ntBASIC9.78□□□□□ -0.84
SgcaP82350 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.78□□□□□ -0.84
SgcaP82350 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
SgcaP82350 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.78□□□□□ -0.84
SgcaP82350 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcaP82350 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.77□□□□□ -0.84
SgcaP82350 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.77□□□□□ -0.84
SgcaP82350 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
SgcaP82350 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SgcaP82350 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SgcaP82350 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.77□□□□□ -0.84
SgcaP82350 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SgcaP82350 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcaP82350 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.77□□□□□ -0.85
SgcaP82350 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SgcaP82350 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.77□□□□□ -0.85
SgcaP82350 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Gm4271-201ENSMUST00000174444 973 ntBASIC9.77□□□□□ -0.85
SgcaP82350 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.77□□□□□ -0.85
SgcaP82350 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.77□□□□□ -0.85
SgcaP82350 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.77□□□□□ -0.85
SgcaP82350 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcaP82350 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.77□□□□□ -0.85
SgcaP82350 Gm39404-201ENSMUST00000216350 313 ntBASIC9.77□□□□□ -0.85
SgcaP82350 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.77□□□□□ -0.85
SgcaP82350 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.77□□□□□ -0.85
SgcaP82350 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
SgcaP82350 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcaP82350 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SgcaP82350 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms